Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------MHDFLKAFKDAFPHT----------------------ISIFLGYLLMGMTFGMLLAQQG-----YDYKVALF------MSLFIYAGAIQFVAITLLSAQASLM-------NVVIVSLLVNARQTCYALSMLDRFKNTKW------RLPYLAHALTDETFALLNLYAPKKGVNETDFMFSIS-----LLNHSYWIFGSLVGSLVGSHFSFDTQGMEFVMTAIFIVLFMEQYKR-----NTNHKNAWLGIAIAVVCLALF---------GTEYFLL----IALVLMVLALILFRKQLEC--------- |
| 1OMO Chain:A ((1-320)) | METLILTQEEVESLISMDEAMNAVEEAFRLYALGKAQMPPKVYLEFEKGDLRAMPAHLMGYAGLKWVNSHPGNPDKGLPTVMALMILNSPETGFPLAVMDATYTTSLRTGAAGGIAAKYLARKNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASV--QPAEEASRCDVLVTTTPSRKPVVKAEWVEEGTHINAIGADGPGKQELDVEILKKAKIVVDDLEQAKHGGEINVAVSKGVIGVEDVHATIGEVIAGLKDGRESDEEITIFDSTGLAIQDVAVAKVVYENALSKNVGSKIKFF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OMO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -296917 for 1848 contacts (-160.7/contact) +
2D Compatibility (PS) -24198 + (NN) -5098 + (LL) 268
1D Compatibility (HY) -1200 + (ID) 1350
Total energy: -328495.0 ( -177.76 by residue)
QMean score : 0.266
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