Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQSHQNLQSQFFIEHILQILPHRYPMLLVDRIIELQANQKIVAYKNITFNEDVFNGHFPNKPIFPGVLIVEGMAQTGGFLAFTSLWGFDPEIAKTKIVYFMTIDKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMIAERE
2GLM Chain:A ((20-171))
-------LQSQFFIEHILQILPHRYPMLLVDRITELQANQKIVAYKNITFNEDVFNGHFPNKPIFPGVLIVEGMAQSGGFLAFTSLWGFDPEIAKTKIVYFMTIDKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMIAERE
General information:
TITO was launched using:
RESULT:
Template:
2GLM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119995 for 1170 contacts (-102.6/contact) +
2D Compatibility (PS) -15674 + (NN) -746 + (LL) 488
1D Compatibility (HY) -24400 + (ID) 7500
Total energy: -167827.0 ( -143.44 by residue)
QMean score : 0.408
(partial model without unconserved sides chains):
PDB file :
Tito_2GLM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GLM-query.scw
PDB file :
Tito_Scwrl_2GLM.pdb
: