Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQNPIEIKAKTLEEALIQASIALNCPIINLQYEVIQMPSKGFLNIGKKEAIILVGVKESVKEVKEESVKEIHQNAEEKQSLGIKTPQEEIITPKPPKKTPKEESHNGDKLHEIKQELKDLFSHLPYKINKVEVSLYEPGVLLIDIDGEDSALLIGEKGYRYKALSYLLFNWIHPAYGYSIHLEISTFLQNQEKVMEAQLQSTIMTVHEVGKGQMKAPDGVLTYIALKKLRKAFPNKYVSIKTNLNDEKYIVINDFNNE |
2YKR Chain:C ((37-125)) | ---------------------------------------------------------------------------------------------------------------KVRQYLTKELAKASVS--RIVIER-PAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAG----VPAQINIAEV-RKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLH |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YKR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61694 for 683 contacts (-90.3/contact) +
2D Compatibility (PS) -9663 + (NN) -4198 + (LL) 8456
1D Compatibility (HY) -2800 + (ID) 550
Total energy: -70449.0 ( -103.15 by residue)
QMean score : 0.326
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