Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNQVKKILGMSVVAAMVIVGCSHAPKSGISKSNKAYKEATKGAPDWVVGDLEKVAKYEKYSGVFLGRAEDLITNNDVDYSTNQATAKARANLAANLKSTLQKDLENEKTRTVDASGKRS-ISGTDTEKISQLVDKELIASKMLARYVGKDRVFVLVGLDKQIVDKVREELGMVKK |
1HQP Chain:A ((79-153)) | ----------------------------------------------------------------------------DVNYAGNNKFVVSYASETALIISNINVDEEGDKTIMTGLLGKGTDIEDQDLEKFKEVTRENGIPEENIVNIIERDDCPA--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HQP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 19197 for 434 contacts (44.2/contact) +
2D Compatibility (PS) -7044 + (NN) 5731 + (LL) 6916
1D Compatibility (HY) -2000 + (ID) 950
Total energy: 21850.0 ( 50.35 by residue)
QMean score : 0.141
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