Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCGNGRFIKKVENSIELLQLNDNPKA
1WVQ Chain:A ((23-38))
-IGQAHFIKTVEDLYEALVTSVPGVK
General information:
TITO was launched using:
RESULT:
Template:
1WVQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3617 for 54 contacts (67.0/contact) +
2D Compatibility (PS) -1399 + (NN) 2186 + (LL) 208
1D Compatibility (HY) -1600 + (ID) 350
Total energy: 2662.0 ( 49.30 by residue)
QMean score : 0.611
(partial model without unconserved sides chains):
PDB file :
Tito_1WVQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WVQ-query.scw
PDB file :
Tito_Scwrl_1WVQ.pdb
: