Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVAPSLLSADFMHLAKEIESV--SNADFLHVDVMDGHYVPNLTMG-PVILENVTQMSQVPL-DVHLMVENASFFVELFAPLNPQIISIHAENEKHPHRVLQLIKSSGITPGIVLNPHTHEESIKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKNIFELQQAGVDVVVSGSYIFESKDRKLAIEGLQNVRQPLA
3QC3 Chain:A ((6-217))
CKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFME---DMMPKVHWLRTQF-PSLDIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEAA
General information:
TITO was launched using:
RESULT:
Template:
3QC3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129219 for 1731 contacts (-74.6/contact) +
2D Compatibility (PS) -22612 + (NN) -11730 + (LL) 464
1D Compatibility (HY) -18000 + (ID) 3900
Total energy: -184997.0 ( -106.87 by residue)
QMean score : 0.507
(partial model without unconserved sides chains):
PDB file :
Tito_3QC3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QC3-query.scw
PDB file :
Tito_Scwrl_3QC3.pdb
: