Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VDFITYIIDFILHIDQHLVEIINNFGIWTYIILFLIVFIETGLVVFPFLPGDSLLFAAGALSVLDGSILHIVPLIITLWLAAVLGDTVNYHIGKKIGTSIPEDSWFGKLINKEKMEKAEAFFNKHGGKTIFIARFMPFIRTFAPFVAGASRMNYRYFLNYNILGATVWVLLCTLAGYFFGNFPIVKDNFSLVVIGIIVVSVIPMVVSFIKSKMDKKSAE |
| 1WMT Chain:A ((2-41)) | -------------------------------------------------------------------------------------------------------------------------------------------HTNIPC-RGTSDCYEPCEKKYNCARAKCMNRHCN----CYNNCPW----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WMT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32029 for 264 contacts (-121.3/contact) +
2D Compatibility (PS) -4138 + (NN) -1047 + (LL) 15400
1D Compatibility (HY) -1600 + (ID) 500
Total energy: -23914.0 ( -90.58 by residue)
QMean score : 0.091
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