Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYKKLATVGMTVLLVGALSACSFNDDKDTSSNNSNNETTSSKSSNNESSSDSLQNKSLDMSYEDAINAFKDKHSDAEISSVELEKSLGKYVYKVDGISN-DNEYEMKFNAETKEQLSDETDRLDREDAGGVEKENEKLSLDGIKSPKEAMDKAVSEQAGDVTSWKIERELDTTYYEVTVKQDNNKYEIKLNAKTLEILQTEQDD |
2GU3 Chain:A ((70-132)) | ------------------------------------------------------EAKEGISEDKAAKIIKDEGLVSKQKEVHLAREGNVLLWEVTYLDKEGQYSLSYVDFTTGKILK--------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GU3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5951 for 407 contacts (14.6/contact) +
2D Compatibility (PS) -6523 + (NN) -1128 + (LL) 7264
1D Compatibility (HY) -1600 + (ID) 450
Total energy: 3514.0 ( 8.63 by residue)
QMean score : 0.283
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