Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKVIFLKDVKGKGKKGETKNVADGYANNFLIKNGYAVEANNAALSTLSAQKKKEDKLAAEELAEAKALKEKMENL-TVELKAKSGEGGRLFGSITSKQIAQTLEKTHGIKIDKRKMDLPEAI-RALGHTKVPVKLHHEVTATLDVHVSEE |
3J8G Chain:H ((1-149)) | MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNIEFFEARRAELEAKLAEVLAAANARAEKINALETVTIASKAGDEGKLFGSIGTRDIADAV-TAAGVEVAKSEVRLPNGVLRTTGEHEVSFQVHSEVFAKVIVNVVAE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J8G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 37005 for 1014 contacts (36.5/contact) +
2D Compatibility (PS) -15036 + (NN) 1443 + (LL) 104
1D Compatibility (HY) -12800 + (ID) 2750
Total energy: 7966.0 ( 7.86 by residue)
QMean score : 0.261
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