Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRGQEEIDKEQYQVLFIKERLIPCVLGAVIGDCLGVPVEFKDR----------EYLKQNPIVEMIGYGTYNQPKGTWSDDSSLTFALMESLIS--GYD----INRIVNNMVSFMDDGFWTPYGEVFDIGSVTRESLNRYKNGVSVFECG-----GKDNFDNGNGAIMRIMPLVFYLGKDFSFGKKNKITEEVTRITHAHPRSILGS-----YVYIEL---------LQNLFANM-DKKLAYEEMQNYIRKNYSDYPFKDELQYYNNILEGNLYELKE--SNIKSSGYVVDTLEASIWAFLTT-----------NSYKEAVLKAVNLGGDTDTIAFITGSLAGIYYKMEQIPVNWIDQIAKKEDILNLCNRFIESLIKQ |
2FP0 Chain:A ((6-323)) | -------------------RFRGCLAGALLGDCVGSFYEAHDTVDLTSVLRHVQSLEPDP------------EALYYTDDTAMARALVQSLLAKEAFDEVDMAHRFAQEYKKDPDRGYGAGVVTVF------KKLLN--PKCRDVFEPARAQFNGKGSY--GNGGAMRVAGISLAYS---SVQDVQKFARLSAQLTHASSLGYNGAILQALAVHLALQGESSSEHFLKQLLGHMEDLEGDAQSVLDARELGMEERPYSSRLKKIGELLDQASVTREEVVSELGNGIAAFESVPTAIYCFLRCMEPDPEIPSAFNSLQRTLIYSISLGGDTDTIATMAGAIAGAYYGMDQVPESW------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2FP0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -126142 for 2272 contacts (-55.5/contact) +
2D Compatibility (PS) -27021 + (NN) -7733 + (LL) 5416
1D Compatibility (HY) -14000 + (ID) 3800
Total energy: -173280.0 ( -76.27 by residue)
QMean score : 0.289
|
|
|