Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VKKNLEQIYAIEFTMGLRYRPMQIRHNIKLIFLLLLFVTWLQGDFMNRLPGNLDITKVDMPLVLLALLCYIILYPQKMTIRFQNLQYLLYICCFQFLVFMVIRYFYSNLIYGIQNMVSLTAQTLVASYVFLLVLWILALIFFYFHFRKKLRNGDYRKDSELQKKRSNLGLKLSKGSYILIGAFFVFILSSQIVGGIMVDIMIISIEIVGIALCSMGIVIFPEQLFTAYCKFKFKEFHIEE |
1Q0W Chain:A ((1-24)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------YPEDEEELIRKAIELSLKESRNSA--------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Q0W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4794 for 88 contacts (54.5/contact) +
2D Compatibility (PS) -2667 + (NN) -2310 + (LL) 22860
1D Compatibility (HY) 0 + (ID) 400
Total energy: 22277.0 ( 253.15 by residue)
QMean score : 0.461
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