Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LAEVDKSTIGEVEGVTFQSYFLIKNMLHTRVVGDLE----KRLPVTLEKMVEYVESNRKEI-ITPIFIVLNYV---GNVPYVDVYVGIDPYDE
3LUR Chain:A ((96-157))
------------------------KYMVFEAQGAVPKAVQQKMEEVHHYIHQYQ---ANTVKSAPFFELYQDGDTTSEKYITEIWMPVK----
General information:
TITO was launched using:
RESULT:
Template:
3LUR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37677 for 290 contacts (-129.9/contact) +
2D Compatibility (PS) -5902 + (NN) -1405 + (LL) 2000
1D Compatibility (HY) -1600 + (ID) 200
Total energy: -44784.0 ( -154.43 by residue)
QMean score : 0.377
(partial model without unconserved sides chains):
PDB file :
Tito_3LUR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LUR-query.scw
PDB file :
Tito_Scwrl_3LUR.pdb
: