Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VITNQRDIDKYYDMLVEKNSNYEGVFFVGVKTTGILCRPTCPAKKPLKENCEFFSTAKEALLASYRPCKRCEPLSNPTKLSPAVKLLVDAIEKNPEKKWTDKDFDDLSISANTARRQFKKQFGMTFIEYARSRRLGLAFKHIRGGNSIINAQLDSGYESGNGFRDAFSKTMGEVPHKSKDITILYSAWLETKLGSMLAISDDDSLLLLEFVDRKGLETEIKKLRMRLNAAITPEKTIIIQQIEAELAQYFNGELIDFKTPIRYIGSDFQENVWEELRRIPIGETISYKGLAEKLGRSTASRAVARANGANQLSLIVPCHRVINTNGALGGYGGGLARKEWLIKHEKMVPK |
4ZYH Chain:A ((2-145)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVYGLYKSPLGYITVAKDDKGFIMLDFCD-------CVEGNSRDDSSFT--------EFFHKLDLYFEGKPINLREPINLKTYPFRLSVFKEVMKIPWGKVMTYKQIADSLG--TSPRAVGMALSKNPILLIIPLHRVIAENG-IGGYSRGVKLKRALLELE----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZYH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75621 for 1069 contacts (-70.7/contact) +
2D Compatibility (PS) -15507 + (NN) -1769 + (LL) 12216
1D Compatibility (HY) -14800 + (ID) 2500
Total energy: -97981.0 ( -91.66 by residue)
QMean score : 0.553
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