Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKLKQLTNQ-LFTSTIFLVTMLFIIPPTFAIADGSKVSFYEYIYGAPLRWLTVISTTEKKGAFLEMFFSENEGINIQWLNLIINFLLVFLVITIIFSLAKKFYNKKNA
1N7L Chain:A ((33-48))
------FINFALILIFLLLIAI---------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1N7L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2110 for 50 contacts (-42.2/contact) +
2D Compatibility (PS) -1380 + (NN) 895 + (LL) 8388
1D Compatibility (HY) -3200 + (ID) 150
Total energy: 2443.0 ( 48.86 by residue)
QMean score : -0.143
(partial model without unconserved sides chains):
PDB file :
Tito_1N7L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N7L-query.scw
PDB file :
Tito_Scwrl_1N7L.pdb
: