Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLKIVSPMGQFFEGEVEGFVINTKEGQQTVLEEHIDCLSFFDYSEISILDAVASDPIFVALGYLHLVQNEANIMAQFASA----DAEQAERIFERLNKRKQTESRRSNDK
2CK3 Chain:H ((17-125))
-SFTFASPTQVFFN----QVDVPT-----------------LRPGLVVV---------FVSSGS--------QLLAEEAVTLDMLDLGAAKANLEKAQSELLGAADE----
General information:
TITO was launched using:
RESULT:
Template:
2CK3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40035 for 312 contacts (-128.3/contact) +
2D Compatibility (PS) -6670 + (NN) 198 + (LL) 3104
1D Compatibility (HY) -2000 + (ID) 650
Total energy: -46053.0 ( -147.61 by residue)
QMean score : 0.369
(partial model without unconserved sides chains):
PDB file :
Tito_2CK3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CK3-query.scw
PDB file :
Tito_Scwrl_2CK3.pdb
: