Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSEFFSTLLLIIGLLIGFFLAILLILAGIRRFFCSAEEPLKRIRRYQVWHNRYQFNEEVTSFFTVIGATLLVSLITVQITAIPFQYTVLIFWSSWLFHLLSFWKKIRVPKKMKNEMIQLAGFLLITALYFVGYFAMKSLHFSIIHVADFPGVIQFGIRTYLTICSLFVASGALIVWQRIYVKLLK |
| 3F9U Chain:A ((48-66)) | -------------------------------------------------------------------------------------KPVMLDFTGYGCVNCRKME---------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3F9U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7913 for 63 contacts (-125.6/contact) +
2D Compatibility (PS) -1943 + (NN) 1113 + (LL) 17068
1D Compatibility (HY) -400 + (ID) 100
Total energy: 7825.0 ( 124.21 by residue)
QMean score : 0.102
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