Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKPRIYTMSFASVYPLYIQKAEKKDRTKEEVDEIIFWLTGYDQDSLQQAIDQA-IDFETFFAEAPKMNPNASLITGVICGYRVEEIEDKLMQQIRYLDKLVDELAKGKKMEKILRK
3IG4 Chain:A ((44-91))
--------------------------------NRNFYYVTGIDEPNVIFMLKKFGNSVEETLF-IEKSDPVMEKWVGKTVS------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3IG4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5889 for 208 contacts (-28.3/contact) +
2D Compatibility (PS) -4762 + (NN) 1483 + (LL) 6620
1D Compatibility (HY) -1600 + (ID) 350
Total energy: -4498.0 ( -21.62 by residue)
QMean score : 0.184
(partial model without unconserved sides chains):
PDB file :
Tito_3IG4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IG4-query.scw
PDB file :
Tito_Scwrl_3IG4.pdb
: