Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKLNELSKSDLLLIFQALSDPIRLDIFLCLLKSKEKRFS--GTTYNISKSTMSHHIKLLKEAKLINLRKEGTTHIYSVNQELVSLISHFFEECGEKDE
3F6O Chain:A ((11-91))
--------------IFQALADPTRRAV-LGRLSRGPATVSELAKPFDMALPSFMKHIHFLEDSGWIRTHKQGRVRTCAIEKEPFTAVEAWLAEQQE---
General information:
TITO was launched using:
RESULT:
Template:
3F6O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50648 for 485 contacts (-104.4/contact) +
2D Compatibility (PS) -8361 + (NN) -1573 + (LL) 1396
1D Compatibility (HY) -4800 + (ID) 1000
Total energy: -64986.0 ( -133.99 by residue)
QMean score : 0.705
(partial model without unconserved sides chains):
PDB file :
Tito_3F6O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F6O-query.scw
PDB file :
Tito_Scwrl_3F6O.pdb
: