Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKIVKMSEKNEHGTLEQFYPETHAEAVKGLVSVSEEEKTIWDQKESTAGAEQKANTALNSAKDYVDTIGEGTVIFKGANLMGAGQSFKWDASKLKFGMTLLFSRYDAANNTPQDYYYHSVFLSKAQLVELAGKGILVQMPSTTYGDRKYLYVSTTGLSGHFDNSNYAAWALRQVTIM |
1T60 Chain:A ((7-32)) | ---------------------------------------------------------------------------------LVTRHSQTTDDPQCPPGTKILYHGYS----------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T60.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2356 for 95 contacts (24.8/contact) +
2D Compatibility (PS) -2413 + (NN) 1966 + (LL) 10176
1D Compatibility (HY) -800 + (ID) 250
Total energy: 11035.0 ( 116.16 by residue)
QMean score : -0.069
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