Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKTIIKRVLQIIPMLFIISIISFALIKLAPGDPVNSFVTPDMNPDDVERIRQSLGLDQPIYVQYFIWLGNLLQGNLGYSIVNSQPVLQQILERIPATLGLVGTSLVLTLLLSIPLGLVAANYENTWIDKVLNGISYIGISIPIFWFGMILIDVFSIQLGWLPSLGMRTIGVDSFWDMAEHAILPVITLTFQGCAAYYRYVRSNTINQLKEEYVLFGYAKGLSKVQIMGHHVLKNSLLPVITLLGMSLPQVITGAFITESIFSWPGMGSLGINAIFQLDYPVIMAITLFSALLLIIGNLLADLAYMIVDPRIREMG |
1Y66 Chain:A ((23-46)) | -------------------------------------------TQETLHEYAQKLGLNQQAIEQFFR--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y66.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1506 for 86 contacts (-17.5/contact) +
2D Compatibility (PS) -2386 + (NN) 2093 + (LL) 23832
1D Compatibility (HY) -1600 + (ID) 350
Total energy: 20083.0 ( 233.52 by residue)
QMean score : -0.008
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