Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSEIKVKEATLAKYATKLESKGKSTEYLPMKGGNMSYSQANSINHFRTALFDLVDAVDNFQGVVGTDAKRLKELGASFTRKDQELERSMGLGGK
1LYP Chain:A ((4-25))--------------------------------------------------------------------KRLRKFRNKIKEKLKKIGQKIQ----


General information:
TITO was launched using:
RESULT:

Template: 1LYP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2175 for 78 contacts (27.9/contact) +
2D Compatibility (PS) -2535 + (NN) -1180 + (LL) 4164
1D Compatibility (HY) -2000 + (ID) 200
Total energy: 424.0 ( 5.44 by residue)
QMean score : 0.669

(partial model without unconserved sides chains):
PDB file : Tito_1LYP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1LYP-query.scw
PDB file : Tito_Scwrl_1LYP.pdb: