Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKYLENCDADNLYWISEIFEDISANLKSQKFIDYLRKLDKKFPELEMTQDIDIAESYF
2GDL Chain:A ((1-31))
------------------------LVQRGRFGRFLRKIRRFRPKVTITIQGSARF---
General information:
TITO was launched using:
RESULT:
Template:
2GDL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 8180 for 136 contacts (60.1/contact) +
2D Compatibility (PS) -3047 + (NN) 427 + (LL) 2116
1D Compatibility (HY) -1200 + (ID) 300
Total energy: 6176.0 ( 45.41 by residue)
QMean score : 0.230
(partial model without unconserved sides chains):
PDB file :
Tito_2GDL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GDL-query.scw
PDB file :
Tito_Scwrl_2GDL.pdb
: