Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LKIKKILPQTIKSEVYFIDEIKNFDIVTEKMNDNFYTYRLGSNVMMWLNDEGVIGEIECIFPAQIDNLITLWEEKNTVVQNGFPMIDTDIVENKTFIPKVRIFNHGDYFILYFSNMYKYNKEIISENLTFYAKDTELIAIKAELT
3W6J Chain:A ((28-100))
--------------------------------------------------------------------------------------------YEIDIYDIPVAQITEQYMAYIHAMQELELDIASE---YLVMAATLLAIKSKML
General information:
TITO was launched using:
RESULT:
Template:
3W6J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9419 for 246 contacts (-38.3/contact) +
2D Compatibility (PS) -5141 + (NN) -1409 + (LL) 7300
1D Compatibility (HY) -4000 + (ID) 500
Total energy: -13169.0 ( -53.53 by residue)
QMean score : 0.090
(partial model without unconserved sides chains):
PDB file :
Tito_3W6J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W6J-query.scw
PDB file :
Tito_Scwrl_3W6J.pdb
: