Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LDKKAIFDSVSNMEEQIGELYQQLGDLKTNLGEMLEENNRLNLENEHLRRRLSLTDEATPEPKAETEAEHGVMAPNRKEAMQQMIELGEGYDNLVQLYKEGFHVCNVHFGSPRGNDEDCLFCLSLLNKK
2GD7 Chain:A ((25-63))
-------ESLQNMSKQ--ELIKEYLELEKCLSRMEDENNRLRLESKRL---------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2GD7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3609 for 167 contacts (21.6/contact) +
2D Compatibility (PS) -4276 + (NN) -2314 + (LL) 5516
1D Compatibility (HY) -4000 + (ID) 850
Total energy: -2315.0 ( -13.86 by residue)
QMean score : 0.329
(partial model without unconserved sides chains):
PDB file :
Tito_2GD7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GD7-query.scw
PDB file :
Tito_Scwrl_2GD7.pdb
: