Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNIVIALIPAVMWGIMPLVVSKIGGKPRQQIIGTTFGALAFAIGVFIFTNPEYTATIIIASFVSGAFWSLGQMNQFRAFTQVGVSKTMPLSTGMQLVGTSLFGVFAFHEWGTTSKLVLGFSALALIIIGIFLTSYQQHKDENSGQNMKKGIITLLISSVGYVGYVVITRWFDISGWDAILPQAIGMVVAGLLFSIKSEEKRFTKQTWLNMIPGVMWATGNLALLFSNKLVGIATG-----FSLSQMGVVISTIGGILFLGEKKTKKELILVIIGVVLVIIGGTMIGIAKS |
4AKM Chain:A ((22-96)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GIQLIVQDKESVFSPRRYFNIDPNATQASGNCGTRKSNLLLNFQGGFVNLTFTKDEESYYISEVGAYLTVSDPET-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AKM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23321 for 331 contacts (-70.5/contact) +
2D Compatibility (PS) -7313 + (NN) 2084 + (LL) 17728
1D Compatibility (HY) -3200 + (ID) 900
Total energy: -14922.0 ( -45.08 by residue)
QMean score : -0.017
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