Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNIVIALIPAVMWGIMPLVVSKIGGKPRQQIIGTTFGALAFAIGVFIFTNPEYTATIIIASFVSGAFWSLGQMNQFRAFTQVGVSKTMPLSTGMQLVGTSLFGVFAFHEWGTTSKLVLGFSALALIIIGIFLTSYQQHKDENSGQNMKKGIITLLISSVGYVGYVVITRWFDISGWDAILPQAIGMVVAGLLFSIKSEEKRFTKQTWLNMIPGVMWATGNLALLFSNKLVGIATG-----FSLSQMGVVISTIGGILFLGEKKTKKELILVIIGVVLVIIGGTMIGIAKS
4AKM Chain:A ((22-96))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GIQLIVQDKESVFSPRRYFNIDPNATQASGNCGTRKSNLLLNFQGGFVNLTFTKDEESYYISEVGAYLTVSDPET--------------------------


General information:
TITO was launched using:
RESULT:

Template: 4AKM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23321 for 331 contacts (-70.5/contact) +
2D Compatibility (PS) -7313 + (NN) 2084 + (LL) 17728
1D Compatibility (HY) -3200 + (ID) 900
Total energy: -14922.0 ( -45.08 by residue)
QMean score : -0.017

(partial model without unconserved sides chains):
PDB file : Tito_4AKM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4AKM-query.scw
PDB file : Tito_Scwrl_4AKM.pdb: