Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKWVKWLIVIVIIAVVAVGAVFLLSKNSGSVTQEKLVTAKVKQGDMKINATGTGAISPVNTQVPDYDELQLVAQMDELDIPNIKKDQEVKVTVTALPDKTYTGK---VKEIAEQGQVQNGVSSFSVIISLDKTDDLKAGM----TADASILVNEKKDALYVPIEAVQKDSDDKYYVLVPEEKDNGKTKKVKKFVETGLHNEDNIEITKGVKKGEKVILPTQETSTVPGAPS |
| 1N54 Chain:A ((152-286)) | -----------------------------------------------------------------------FVSVTQEEDVPQVRRDWYVYAFLSSLP---WVGKELYEKKDAEMDRIFANTESY-----LKRRQKTHVPMLQVWTADKPHPQEEYLDCLWAQIQKLKKDRWQERHILRP---------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1N54.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8178 for 514 contacts (15.9/contact) +
2D Compatibility (PS) -9491 + (NN) 1426 + (LL) 8864
1D Compatibility (HY) -1600 + (ID) 1350
Total energy: 6027.0 ( 11.73 by residue)
QMean score : 0.087
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