Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKFKKVVLGMCLIASVLVFPVTIKANACCDEYLQTPAAPHDIDSKLPHKLSWSADNPTNTDVNTHYWLFKQAEKILAKDVN-----HMRANLMNELKKFDKQIAQGIYDADHKNPYYDTSTFLSHFYNPDRDNTY-----------LPGFANAKITGAKYFNQSVTDYREGKFDTAFYKLGLAIHYYTDISQPMHANNFTAISYPPGYHCAYENYVDTIKHNYQATEDMVAKRFCSDDVKDWLYENAKRAKADYPKIVNAKTKKSYLVGNSEWKKDTVEPTGARLRDSQQTLAGFLEFWSKKTNE |
| 1QMD Chain:A ((8-163)) | -------------------------------------------------------------TGTHAMIVTQGVSILENDLSKNEPESVRKNL-EILKENMHELQLGSTYPDYDKNAYDL--YQDHFWDPDTDNNFSKDNSWYLAYSIPDTGESQIR--KFSALARYEWQRGNYKQATFYLGEAMHYFGDIDTPYHPANVTAVDSAG--HVKFETFAEERKEQYK--------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QMD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31346 for 943 contacts (-33.2/contact) +
2D Compatibility (PS) -14905 + (NN) -6275 + (LL) 9168
1D Compatibility (HY) -7200 + (ID) 2100
Total energy: -52658.0 ( -55.84 by residue)
QMean score : 0.311
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