Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------VSERSMKRLMKGAAWLTAASLISKILSAIYRVPFQNMVGDVGFYIFQQVYPIYGIAMTLALGGF--PVVISKMLAEAEGDVRRQQIIMRAV-----SRMLRIVSIVIFAFLFLFANLIAIMMG--DPALSELI--------RVISFVFLLM----PQLAFMRGFFQGE---GDMIPTAISQTVEQIIRVAIIL---------IGAGLALHFNFDL-----YDAGSMAMSGAFF------GGVSGIFILRHFYNKKVRLGEGIQPAVFTNKEEKVGIGRTFLRQSVAICVVSSMLILFQLVDSFQVYRLMSD--SGIPDFIAKSLKG--VYDRGQPILQLGLVISTGLALALVPMITAARVQGQQKE---------LKRSVLLAIKITLILSGAETIGLIVIMRPLNQMLFQTPDGTFVLQLFMPAVFLSSLIIMLSSILQGFGKIAVPAVGVGIGLIVKWVTGGILIP--RLATVGASVSTCVGLLVILLICYVSLKQTIRVPFVEKTMLFRLVAALVLMAVFPCLFEWLAPLDTRLGSAFQAIVSALVGGGIFLVFALRYKLLGPKDFVFLPFGSKLLALSKLVARK-- |
| 4Y9J Chain:A ((1-592)) | TITARHTQYSHAKTGGFSQTGPTLHNPYKDDPILDRTLRRLLPESEYMRVAADLSKFGDRITS--------EVEHLGRQAELEQPRLEHQDAWGKRVDKLIVCNEWHKLKQICAEEGVISIGYEDSVDPFVRRIHQVAKLFLFSPSAGLVSCPMAMTDGAVKTLTSLNLYGKHKLATEAVDRLRSRDPSKAWTSGQWMTEKKGGSDVAGGCDTYAVQIDKDTYRLHGYKWFSSAVDADVALTLARIVDSDGNALEGSRGLSLFLLKIRDESGNLNGIQMVRL----KNKLGTKQLPTAELLLDG--AIAERIGDQGRGVAGISNMLNITRIHNAVASLGYMRRIISLARDYSTKRVVFGQTQSKWPLHTTTLAKMEVDTRGSMLLLFEAARLLGLSEAGKSSDVEAMMLRLITPVLKLYAGKQAVPMVSEGIECFGGQGYMEDTGLPTLLRDAQVTPIWEGTTNVLSLDVLRVFS--GKENILLAFGKRVEQLLGNTKTEDEKLKKSKEAVESALKQLQKLLVKASD--SAIQGETRIDSVARHIAFTIARIYSGALLIDHASDSSVANQSDIEVAYRYCCEQPLI---DLRWEWFA---------SERVKADREIVFDNFT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Y9J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -533327 for 4154 contacts (-128.4/contact) +
2D Compatibility (PS) -51693 + (NN) -8909 + (LL) 2396
1D Compatibility (HY) -6800 + (ID) 3800
Total energy: -602133.0 ( -144.95 by residue)
QMean score : 0.286
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