Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLTWVIRVCFLILGGTTGVFSLPALWVKLGIGHILLINNPYTDALIGALIFYLITFWAVKYVEAALNWLEEKLAKIAIATLVYGGLGLFVGLVIAFFASNALSQTNIPLLNSVVPVILTLVLGYLGFRIGISRRNEFGNFVNNRNAKKRTPEEEKTEEKSKKTYKILDTSVIIDGRIA-----DILTTGFLDGTVVIPLFVLAELQHIADSSDTLKRTRGRRGLDILNRIQKEDAIQVEMYEGDFEDTPEVDSKLVKLAKVMGGIVVTNDYNLNKVCEFQNVPVLNINDLANAVKPVVLPGEKMTVLMVKDGKEHNQGVAYLDDGTMIVVEDGRKFINETIQVEVTSVLQTSAGRMIFAKPS
1O4W Chain:A ((10-126))----------------------------------------------------------------------------------------------------------------------------------------------------------------KVRCAVVDTNVLMYVYLNKADVVGQLRE-FGFSRFLITASVKRELEKLEMSLRGKEKVAARFALKLLEHF--------EVVE----TESEGDPSLIEAAEKYGCILITNDKELKRKAKQRGIPVGYLKED------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1O4W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9620 for 811 contacts (-11.9/contact) +
2D Compatibility (PS) -11617 + (NN) -1810 + (LL) 19372
1D Compatibility (HY) 2800 + (ID) 500
Total energy: -1375.0 ( -1.70 by residue)
QMean score : 0.260

(partial model without unconserved sides chains):
PDB file : Tito_1O4W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1O4W-query.scw
PDB file : Tito_Scwrl_1O4W.pdb: