Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTRLKEDIATIIKNDPATKSFFDAFLTNPGLHALWWHRVANFFYRHKMVLFGKVLSQNARFWTNIEIHPGATIGRRLFIDHGAGIVIGETAEIGDDVTIFHGVTL--------GGTGKDCGKRHPTVGDGALVSAGAKVLGPVEIGAGARIGAGAVVLKDVPPGATVVGIPAKVVRLNGRTVGHAVPKMDELTLRIAELENIVEKLLKEKE
3P47 Chain:A ((105-268))
----LKTDLIAAYAGDPAAPGLSLIIRCYPGFQAVIVYRIAHVLYECGERYYCREMMESVHSYTSIDIHPGASIKGHFFIDHGVGVVIGETAIIGEWCRIYQSVTLGAMHFQEEGGVIKRGTKRHPTVGDYVTIGTGAKVLGNIIVGSHVRIGANCWIDRDVDSNQTV--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3P47.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113393 for 1223 contacts (-92.7/contact) +
2D Compatibility (PS) -16711 + (NN) -6431 + (LL) 4040
1D Compatibility (HY) -13200 + (ID) 3200
Total energy: -148895.0 ( -121.75 by residue)
QMean score : 0.462
(partial model without unconserved sides chains):
PDB file :
Tito_3P47.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P47-query.scw
PDB file :
Tito_Scwrl_3P47.pdb
: