Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKGKKYQDALKQIDANKVYTAEEAVELAKKIDFAKFDATVEVAFRLGVDPKKADQQIRGAVVLPNGTGKTQRVLVFAKGEKAKEAEAAGADYVGESEFVEKINQGWFDFDVIVATPDMMGEVG-KLGRVLGPKGLMPNPKTGTVTMDVTKAVNEIKAGKVEYRVDKAGNVHAAIGKVSFDAAKLVENFRTVNDVLQKAKPAAAKGTYVKNLSVTTTFGPGIKVDPASL
1ZHO Chain:A ((2-228))
--KHGKRYRALLEKVDPNKIYTIDEAAHLVKELATAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKILDGWMDFDAVVATPDVMGAVGSKLGRILGPRGLLPNPKAGTVGFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGTFLRSVYVTTTMGPSVRINPHS-
General information:
TITO was launched using:
RESULT:
Template:
1ZHO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100006 for 1803 contacts (-55.5/contact) +
2D Compatibility (PS) -25051 + (NN) -15107 + (LL) 528
1D Compatibility (HY) -18800 + (ID) 6150
Total energy: -164586.0 ( -91.28 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_1ZHO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZHO-query.scw
PDB file :
Tito_Scwrl_1ZHO.pdb
: