Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALNIEEIIASVKEASVLELNDLVKAIEEEFGVTAAAPVAVAAAGGAAAEQTEFTVELASAGDSKIKVIKVVREITGLGLKEAKEL-VDN-APKALKEGIAKDEAEEIKAKLEEVGANVEVK
1BVU Chain:A ((226-318))
----------------------MAKIMSEEYGMKV---VAVSDTKGGIYNPDGLNADEVLAWKKKTGSVKDFPGATNITNEELLELEVDVLAPSAIEEVITKKNADNIKAKIVAELAN----
General information:
TITO was launched using:
RESULT:
Template:
1BVU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6561 for 576 contacts (-11.4/contact) +
2D Compatibility (PS) -8779 + (NN) 4170 + (LL) 3052
1D Compatibility (HY) -2800 + (ID) 1500
Total energy: -12418.0 ( -21.56 by residue)
QMean score : 0.190
(partial model without unconserved sides chains):
PDB file :
Tito_1BVU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BVU-query.scw
PDB file :
Tito_Scwrl_1BVU.pdb
: