Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNLFLTSSFKDVVPLFTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEELDIATESLGEITTKLRKNDFIYVTGGNTFFLLQEL-KRTGADKLILEEIAA-GKLYIGESAGAVITSPNIAYIQTMDSTKKAVNLTNYDALNLVDFSTLPHYNNTPFKEITQKIVTEYAGKSQIYPISNHEAIFIRGKEVITKRLS |
| 2YWD Chain:A ((3-91)) | --------------------------GVVGVLALQGD-------FREHKEALKRLGIEAKEVR--K------KEHLEGLKALIVPGGEST-TIGKLAREYGIEDEVRKRVEEGSLALFGTCAGAIWLAKEI---------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29271 for 639 contacts (-45.8/contact) +
2D Compatibility (PS) -9752 + (NN) -5773 + (LL) 8868
1D Compatibility (HY) -5200 + (ID) 900
Total energy: -42028.0 ( -65.77 by residue)
QMean score : 0.485
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