Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDLSDFLNSGWESVLVVLGIVGVIINFLSKAGKGTEEENKKAPQPRPNLRSMHQASRTQTTKKPEKRKVSQGTFTQNKEQDKVIAEQKAAQQKMLREIRRESDVAKGKNIIKSTSSHQKKARKLRGRLQEAIITKEILDKPVSLRKNHL |
4JPN Chain:A ((2-76)) | ---------------------------------VDAGFENQKELTKMQLDNQKEIAEMQNETQKEIAGIQSAT-SRQNTKDQVYAQNEMLAYQQKESTARVASIMENTN---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JPN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 23807 for 293 contacts (81.3/contact) +
2D Compatibility (PS) -8297 + (NN) -267 + (LL) 5764
1D Compatibility (HY) -400 + (ID) 450
Total energy: 20157.0 ( 68.80 by residue)
QMean score : 0.658
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