Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQYKIKEMPLEELEPKVVEGLLEHKERLGYNIPKKDTEYIGFAALSEVGEMVGGVTAKISYGELHVSLLSVDPSTQGSGVGTELMAQIERYGRANSCHHISLTTFSY--QAPEFYRKCGFTELGRVKDFPIKGEEKYFFIKYL
4F6A Chain:A ((89-156))
---------------------------------------------------------------VYISDLCVDETRRGGGIGRLIFEAIISYGKAHQVDAIELDVYDFNERAKRFYHSLGMRCQKQTMELPL------------
General information:
TITO was launched using:
RESULT:
Template:
4F6A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34946 for 327 contacts (-106.9/contact) +
2D Compatibility (PS) -7166 + (NN) -1663 + (LL) 5568
1D Compatibility (HY) -6800 + (ID) 900
Total energy: -45907.0 ( -140.39 by residue)
QMean score : 0.541
(partial model without unconserved sides chains):
PDB file :
Tito_4F6A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4F6A-query.scw
PDB file :
Tito_Scwrl_4F6A.pdb
: