Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------MKDKTKKRKWNWAQILAIFV--------------LVTLVVSMVYATVNLITAPSGNVPEGQQTKGDYSLMLMQCVLGVVVLFLPSIISKKMKFVIPNAMYIVFIVFLYCAIYLGEVRSFYYLIPNWDTIL-----HTFSGAMLGGLGFSIVSLLNNDERITLSMSPVFV---ALFACSFAVFLGVFWEFY---EFAADSFGMNMQKTMLEDGTMLQGHAAVAD--TMGDLFV-----DFLGAFVIS-------------------IIGYFSIRKNKKWMKNFEFKKVDEEVK------------ |
| 2IU8 Chain:A ((21-366)) | MSQSTYSLEQLADFLKVEFQGNGATLLSGVEEIEEAKTAHITFLDNEKYAKHLKSSEAGAIIISRTQFQKYRDLNKNFLITSESPSLVFQKCLELFITPVDSGFPGIHPTAVIHPTAIIEDHVCIEPYAVVCQ-HAHVGSACHIGSGSVIGAYSTVGEHSYIHPRVVIRERVSIGKRVIIQPGAVIGSCGFGYVTSAFGQHKHLKHLGKVIIEDDVEIGANTTIDRGRFKHSVVREGSKIDNLVQIAHQVEVGQHSMIVAQAGIAGSTKIGNHVIIGGQAGITGHICIADHVIMMAQTGVTKSITSPGIYGGAPARPYQEIHRQVAKVRNLPRLEERIAALEKLVQK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IU8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -213505 for 1668 contacts (-128.0/contact) +
2D Compatibility (PS) -25309 + (NN) 5395 + (LL) 208
1D Compatibility (HY) 0 + (ID) 1500
Total energy: -234711.0 ( -140.71 by residue)
QMean score : ?
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