Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKKRLLLASRWIIMLIIYAGLWTYTLFQGDTASWFLTYFFSFILLLLFLSSIYPLKAWKVNRSFVKNTYHDGDLIDMQVSFTRKSRYPVGYLLFQQKIPATFGKVRARQQVVYPLFKKQFTVTLAGFVGVRGIHSFPPVDVETSDAFGLLERSRQLSSEKSLTIYPTYFPNVLEKISEASPENERNAAYWTLKKNSNLHSLREFSSGDRISLIDWKSSAKSDQLMTREFENSATSRLSVIFYGASHP---NFELSLRAAYSFIRKISEENGEIRVTLLGDQTSKFAPAKGTSRLQDISTAFAEIAPVDSL---TLQES----LDS--NLHSGEKILLFTPCMDTM--------------LMQKVTRLTDNKQLQIIT-FQSEHSKAMDAPAIFLEQASLLSRWERETK |
| 2X31 Chain:A ((7-155)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SDRVLIFAVDASGSAAVA-LSEAKGAVELLLGRAYAARDHVSLITFRGTAAQVL-LQPSRSLTQTKRQLQGLPGGGGTPLASGMEMAMVTAKQARSRGMTPTIALLTDGRGNIALDGTANRELAGEQATKVARAIRASGMPAVIIDTAMR-------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2X31.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -32091 for 855 contacts (-37.5/contact) +
2D Compatibility (PS) -12306 + (NN) 727 + (LL) 19676
1D Compatibility (HY) 400 + (ID) 400
Total energy: -23994.0 ( -28.06 by residue)
QMean score : 0.359
|
|
|