Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATQKNLVDLATKAYIYGFPFIFNTQQIERYVTVGIGGTKQVPFNNFTHASRLAEPSDKFVSVNNDTIYSNAPIDV-------SAGPVVLSVP-DTSGRYYVLQFVDAWSN-------NFAYVGKRATGT-SAGKFLLT-PPNWNGDVPADM---IEIKFPTNIGIIIGRLACDGEADLPTVRELQEQLKITPLNEGKEVDGFPEYDRSLGKELAFFEQLRVYMAQFPPAERDLVKQESFAPIGLMEKGVSPYSNPSEELKNALIEGAKAGLANIKKATTNFKSENGWGLTQHLFDYNADFFEIGTKKSLDWVIEDREEAYIIRAVSAITALWGNHGYEAVYLMTWTDTDGNALNGKNKYTLELNPIPPVDSFWSITMYDLPEYFLCENPINRYSIGDRTPGIQYNDDGGITIVVSKDEPTDPKERANWLPAPDAEFRPMFRLYNPQQPLVDGSYHFPGFEKK |
| 3U07 Chain:A ((307-418)) | -----------------------------------------------------------WGLPPIEASYRKSDFDSIGQKLDGSKHDYVMRFKAPNVSEFWSVTIYGNDNRLMAKNDLNRHSRGDRTMKADKDGYYTIYMSANE----KGRADDPNFLPVPEKPFYAIMRFYGAD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U07.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12168 for 445 contacts (-27.3/contact) +
2D Compatibility (PS) -8959 + (NN) -356 + (LL) 19152
1D Compatibility (HY) 2800 + (ID) 450
Total energy: 19.0 ( 0.04 by residue)
QMean score : 0.051
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