Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LKKMGFILICCLFVCASPFYVKANTDKATSKAGVIFTHDPRKPKTGTD--DRSGTFPTKVPPKRL-PKTGDTADFYLVLLGVGFILIAKKGYFKEVREEIR
1AJN Chain:B ((203-240))
-------------------------------------HDPRLPVPGTGKWDWKGLLPFEMNPKVYNPQSGYIANW--------------------------
General information:
TITO was launched using:
RESULT:
Template:
1AJN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4357 for 97 contacts (44.9/contact) +
2D Compatibility (PS) -3898 + (NN) -5411 + (LL) 5740
1D Compatibility (HY) -1600 + (ID) 750
Total energy: -1562.0 ( -16.10 by residue)
QMean score : 0.716
(partial model without unconserved sides chains):
PDB file :
Tito_1AJN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AJN-query.scw
PDB file :
Tito_Scwrl_1AJN.pdb
: