Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMQIFPAIDLKNGQCVRLFQGDFSKKTVVNEDPIAQAKAFATDGATYLHIVDLDGALEGRPINLEVIQKMKITAKIPVQVGGGIRSMAQVDYYLESGIDRVIIGSAALTDPDFLRAAVQKYGAKIAAGIDAK----NGFVATRGWLDVSQVSYLDLAKRMEKVGVETIIYTDISRDGTLTGPNLEQMANLKEHVKVNLIASGGVSSRADLEALAQL---GLYGAIAGKALYNHHISMSDIVEVEQIAY
2Y88 Chain:A ((5-235))--LLPAVNVVEGRAVRLVQGKAGSQTEYGS-AVDAALGWQRDGAEWIHLVDLDAAF-GRGSNHELLAEVVGKLDVQVELSGGIRDDESLAAALATGCARVNVGTAALENPQWCARVIGEHGDQVAVGLDVQIIDGEHRLRGRGW-ETDGGDLWDVLERLDSEGCSRFVVTDITKDGTLGGPNLDLLAGVADRTDAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKALYARRFTL-----------


General information:
TITO was launched using:
RESULT:

Template: 2Y88.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -129612 for 2018 contacts (-64.2/contact) +
2D Compatibility (PS) -24687 + (NN) -11664 + (LL) 1784
1D Compatibility (HY) -17200 + (ID) 4050
Total energy: -185429.0 ( -91.89 by residue)
QMean score : 0.609

(partial model without unconserved sides chains):
PDB file : Tito_2Y88.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2Y88-query.scw
PDB file : Tito_Scwrl_2Y88.pdb: