Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYQSITANDLEQDLKKVPHNILDVRDADAFVEGHIPDAINIPINELPEKLATLDKEKAYTIICYAGGRSERASQFLAAEGFDVTNVMGGMGAFHGTVTN
3NTA Chain:A ((489-561))
--------------------LLDVRNPGELQNGGLEGAVNIPVDELRDRMHELPKDKEIIIFCQVGLRGNVAYRQLVNNGYRARNLIGGYRTY------
General information:
TITO was launched using:
RESULT:
Template:
3NTA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54324 for 520 contacts (-104.5/contact) +
2D Compatibility (PS) -7814 + (NN) -1717 + (LL) 1368
1D Compatibility (HY) -6800 + (ID) 1200
Total energy: -70487.0 ( -135.55 by residue)
QMean score : 0.619
(partial model without unconserved sides chains):
PDB file :
Tito_3NTA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NTA-query.scw
PDB file :
Tito_Scwrl_3NTA.pdb
: