Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAHENLRELEDQLIELRQTYQEVISETREFEDPQLQNGPINAAEVRLSALRHEIAEVEKKIKKAESKTE
3EFG Chain:A ((9-58))
-----DQELEARLVELETRLSFQEQALTELSEA------LADARLTGARNAELIRHLLEDL--------
General information:
TITO was launched using:
RESULT:
Template:
3EFG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4073 for 192 contacts (21.2/contact) +
2D Compatibility (PS) -5672 + (NN) -2490 + (LL) 1012
1D Compatibility (HY) -2400 + (ID) 450
Total energy: -5927.0 ( -30.87 by residue)
QMean score : 0.324
(partial model without unconserved sides chains):
PDB file :
Tito_3EFG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EFG-query.scw
PDB file :
Tito_Scwrl_3EFG.pdb
: