Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFNLQKGFPENFKWGSSTNAQQFEGGYKEGGKGLSIAD-VRVIPDMPDESDFESFKTASDHYHHYKEDIAYYGEMGFQIYRFTMAWSRIFPNGDETEPNDAGVEFYSNMLAELEKYNIEPVVTLYAYDMPLQLLEKYNGWLDRAIIKDYLHYVETVVKLFKGRVKYWVPFNEQNFISIDSEYMSGYRA---KNKAEVFQIQHHFNLCYAEATKLVHQIDP-DAKVGGNIGNICPYPMTCKPEDVEASDKVAQQLGYAYGDIYFRGYYPKYFLKEYEGVDFEQIILDDDLTIIKSSEPDFMSLTYYMSSAIEAKGEEEVVVMNGIKAPNPYCETTEWGWTIDPYGFKHYLQEFYHRY-QLPILILENGMGARDEKNTDDTIDDTYRIDYLASHIARMQEAVEEGCEIIGYLTWSATDLYSTREGFEKRYGFVYVDKDNSYKRLKKKSFYWYKKVIETNGNDLNY |
4HZ8 Chain:A ((4-441)) | ------KFPEGFLWGAATSSYQIEGAWNEDGKGESIWDRFTRIPGKIKNGD--SGDVACDHYHRYEQDLDLMRQLGLKTYRFSIAWARIQPDSSR-QINQRGLDFYRRLVEGLHKRDILPMATLYHWDLP-QWVEDEGGWLSRESASRFAEYTHALVAALGDQIPLWVTHNEP-MVTVWAGYHMGLFAPGLKDPTLGGRVAHHLLLSHGQALQAFRALSPAGSQMGITLNFNTIYPVSAEPADVEAARRMHSFQNELFLEPLIRGQYNQATLMAYP--NLPEFIAPEDMQTI-SAPIDFLGVNYYNPMRVKSSPQPPGIEVVQVESP-----VTAMGWEIAPEGLYDLLMGITRTYGKLPIYITENGAAFDDQPDQSGQVNDPQRVGYFQGHIGAARRALADGVDLRGYYAWSLLDNFEWAEGYSKRFGIIYVDFETQQRTL-KQSAQWYRDVIANNG----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HZ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -193219 for 3876 contacts (-49.9/contact) +
2D Compatibility (PS) -45729 + (NN) -17735 + (LL) 1216
1D Compatibility (HY) -28000 + (ID) 6900
Total energy: -290367.0 ( -74.91 by residue)
QMean score : 0.537
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