Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MFKNLFKKPKMKDEMLEMKQNQYGARAFNMMIIIVAIVILIKAVVLEASISELWVELLLLIVGGGYYFYSVL---KNNVPFMPTISLKQTIRLVFLISAIFG-----ISVGIRNVFFLYADNM----SGTELSYQMMMFFFISLFTAIGSGVIFGALAYCLYQLSKWQEKNIMKKIEVENAED----------------------------------------------------------------------------------------------------------------------------- |
| 1II2 Chain:A ((1-522)) | PPTIHRNLLSPELVQWALKIEKDSRLTARGALAVMSYAKTGRSPLDKRIVDTDDVRENVDWGKVNMKLSEESFARVRKIAKEFLDTREHLFVVDCFAGHDERYRLKVRVFTTRPYHALFMRDMLIVPTPEELATFGEPDYVIYNAGECKADPSIPGLTSTTCVALNFKTREQVILGTEYAGEMKKGILTVMFELMPQMNHLCMHASANVGKQGDVTVFFGLSGTGKTTLSADPHRNLIGDDEHVWTDRGVFNIEGGCYAKAI---------GLNPKTEKDIYDAVRFGAVAENCVLDKRTGEIDFYDESICKNTRVAYPLSHIEGALSKAIAGHPKNVIFLTNDAFGVMPPVARLTSAQAMFWFVMGYTANVPGVEAGGTRTARPIFSSCFGGPFLVRHATFYGEQLAEKMQKHNSRVWLLNTGYAGGRADRGAKRMPLRVTRAIIDAIHDGTLDRTEYEEYPGWGLHIPKYVAKVPEHLLNPRKAWKDVRQFNETSKELVAMFQESFSARFAAKASQEMKSAVPRYVEFA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1II2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -108495 for 1030 contacts (-105.3/contact) +
2D Compatibility (PS) -16449 + (NN) 3533 + (LL) 1396
1D Compatibility (HY) 2800 + (ID) 1450
Total energy: -118665.0 ( -115.21 by residue)
QMean score : 0.017
|
|
|