Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEEELEVIHKGL-ANAKNGFKAVPGKLYLTATYIVHKPNDYFDEEINIPLNRVAKIRGVRTKILGKELLSNILEIDMISGVKYQFVVNK-------QKKWLEAVSEVLESRGESEKLG |
1PFJ Chain:A ((4-103)) | --SSEEVLLIVKKVRQKK----QDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEG-----KAKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKF------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PFJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44608 for 635 contacts (-70.2/contact) +
2D Compatibility (PS) -9655 + (NN) 851 + (LL) 932
1D Compatibility (HY) 0 + (ID) 750
Total energy: -53230.0 ( -83.83 by residue)
QMean score : 0.340
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