Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQAIDAILGHYSVRKFEDKDLTEEALTLLIKSAQAASTSSFVQAYSIIGITDKDIREQISAIAGNQPYTVQTGQLFIFVADLARHHAILEEHQVDTAALETSEKWLVSVIDAALAAQNMAIAAESLGLGICFIGGIRNDVEQIAEILDLPPYTMPLFGLTIGH----PVANKEKAKPRLPQDLVYHENSYKKMNPETLAEYDKQIKTYYNERTAGKRVEGWSEQIARGLGRPSRLDLKAFLEKQHLNQK
3KOQ Chain:A ((29-181))
----------RYSCRNYQDRKVEKEKLEKVLDVARIAPTGGNRQPQRLIVIQEKEGINKLSKAA-----NIYDAPLAILVCG--------DKDKVWTRPFDGKQ---LTDIDTSIVTDHMMLQATELGLASVWVCYFNPDI--IREEFSLPDNLEPINILLMGYESKIPESPERHEKTRVP---------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3KOQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101659 for 1127 contacts (-90.2/contact) +
2D Compatibility (PS) -16267 + (NN) -9865 + (LL) 6884
1D Compatibility (HY) -9200 + (ID) 1950
Total energy: -132057.0 ( -117.18 by residue)
QMean score : 0.555
(partial model without unconserved sides chains):
PDB file :
Tito_3KOQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KOQ-query.scw
PDB file :
Tito_Scwrl_3KOQ.pdb
: