Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKDIDWSNLGFSYIKTDKRYISYWKDGEWDEGALTEDNTLHISEGSTALHYGQQCFEGLKAYRCKDGSINLFRPDRNAARIQKSCERLLMPHIPTEKFIDAVMQVVRANEEFVPPYGTGATLYLRPFVIGVGDNIGVHAAPEYIFSVFCSPVGPYFKGGMAPTNFIVSD--FDRAAPNGTGAAKVGGNYAASLLPGQAAKERNFGDCIYLDPATHTKIEEVGSANFFGI-TKDD---KFVT-PYSPSILPSITKYSLLYLAEHRLGLEAVEGDVYIDKL------DEFKEAGACGTAAVITPIGGIQTKD-DFHVFHSETEVGP-VTKRLFDELCGIQFGDVEAPEGWIYKVK |
| 5BWT Chain:A ((32-369)) | ---------LVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPD-AAGTSLYVRPVLIGNEPSLGVSQPTRALLFVILCPVGAYFP---VTPVSLLADPAFIRAWVGGVGNYKLGGNYGPTVLVQQEALKRGCEQVLWLYGPDH-QLTEVGTMNIFVYWTHEDGVLELVTPPLNGVILPGVVRQSLLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHRILYKDRNLHI--PTMENGPELILRFQKELKEIQYG-IRAHE-WMFPV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5BWT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152164 for 2600 contacts (-58.5/contact) +
2D Compatibility (PS) -34695 + (NN) -12800 + (LL) 344
1D Compatibility (HY) -30000 + (ID) 5300
Total energy: -234615.0 ( -90.24 by residue)
QMean score : 0.424
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