Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LVIYLLAGFFLLLFIVLSFIDRRRISNGIILTMALFFSVLSVVYATFSKGNELLVSVMGTVLLLLVLLIPFFVVGIATMLIVNGRLMLKREGRKLANMLPLIIGLGILALIITWFGSILKTGSPILGIVVVFIVALVGYFSFLFLSFLLSTFLYQFNFPRYNQDFLIVLGSGLIGGDRVPPLLASRLNRAIKFYDKQYAKKGKRATFIVSGGQGAN----ET--ISEAEAMRGYLIEQGIDENFIIMEDQSVNTLQNMKFSKAKMDAIMSNYNSLFSTNNFHLFRAGIYARKAGLKSQGIGAKTALYYMPNALIREFIAITVMYKKVHMVLLGLLLLFFAFLAIIGVTFR |
| 3LDT Chain:A ((64-134)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RLNEICYPGLNNVIRLLNFYP-----QSTIYVAGFTDNVGSRKRKLSQAQAETMMTFLWANGIAAKRLKAEGYG--------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LDT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21637 for 349 contacts (-62.0/contact) +
2D Compatibility (PS) -6591 + (NN) -3606 + (LL) 25816
1D Compatibility (HY) -4400 + (ID) 700
Total energy: -11118.0 ( -31.86 by residue)
QMean score : 0.492
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