Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTETRTEKKKKTTSTFTKVMKIASVALLGIIFFSITGLAAKYYITVQNTFSKINVPLESSNKTLSDLEKKKPFSVLLMGSDARAGE-KNGRADTIILATANKQQNAVEMVSIPRDTKVDYGNGDIGKINASYSNGGPSGTVSAVEKLMPGVPVDYFISINMEGFKDLVDAVGGITVYNDIDLTE-----V---NSKFVKGNITLNGTEALQYVRIRHEDPRGDFGRQDRQRDVIIGIANKVISSSGVSNFESIMKAVGDNFQTNMTLTDITSMAANYSS-V-LKNVDSQELKGEGEMIYSESYGFDLYY-FAPDKTDL-ERIITMFKKSLDITE |
| 3PE5 Chain:A ((104-361)) | -------------------------------------------------------------------KDPMVLNIMLFGSDERPGETGYGRSDTMMLLSIDNRNKKLKLTSFMRDTYVNVPEWGDTKLTHAYSYGGPALAIETIERNFG-IDIDRYAVVYFDTFPGIVDTLGGIEVEMTQTEADVMNESVGPEFANFTEGKNTLNGATALVYVRIRYGV-GDDFGRTQRQRDFMLQVLNKVKGTRDVGTLLTLLTKILPGVTTNISVNEMAGLAGGAISSYMDYPMYQFRLPEDGAFSAVD--VDAGNVLAIDDWDAAREHLQRFIYED----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PE5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 62626 for 1660 contacts (37.7/contact) +
2D Compatibility (PS) -22850 + (NN) 15903 + (LL) 5800
1D Compatibility (HY) 9200 + (ID) 450
Total energy: 70229.0 ( 42.31 by residue)
QMean score : -0.070
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