Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQKTFIKVTCSILTISDT--RNLDTDTSGQLIQSALETA---GHEVISRVVVPDDVTLIKQKINELAANGSFCLI-TNGGTGIARRDVTYEALFATIQQEIPGFGEIFRMLSYEEVGSRAMVSRAFAGFSESGLLLFALPGSSNACQLAVQKLIIPELPHLIAERQK
1IHC Chain:A ((14-166))
-------QIRVGVLTVSDSCFRNLAEDRSGINLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGFAPRDVTPEATKEVIEREAPGMALAMLMGSL-NVTPLGMLSRPVCGI-RGKTLIINLPGSKKGSQECFQ-FILPALPHAI-----
General information:
TITO was launched using:
RESULT:
Template:
1IHC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111170 for 1193 contacts (-93.2/contact) +
2D Compatibility (PS) -15682 + (NN) -4927 + (LL) 1556
1D Compatibility (HY) -10000 + (ID) 2700
Total energy: -142923.0 ( -119.80 by residue)
QMean score : 0.605
(partial model without unconserved sides chains):
PDB file :
Tito_1IHC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IHC-query.scw
PDB file :
Tito_Scwrl_1IHC.pdb
: